This is how I've always set it up, but now it isn't working, maybe I'm forgetting something really obvious? =P
Anyways, thanks for the help!
Also, I noticed something else, when I would have the Blues Mute set to a keyswitch (In the Lead Engine), and as I would play the track it would play fine, and if I was to change the tone to "Neck" during playback, the track would mess up and instead of play the chords and the proper muted chords, it would start playing a single note with weird mutes in random places. I wouldn't be able to fix it so I would have to close the preset and re-load it and it would work fine again, but I can live with this... I need the Midi Guitar feature to work!